Synthesis and evaluation of oligodeoxynucleotides containing acyclic nucleosides: introduction of three novel analogues and a summary.
Identifieur interne : 004021 ( Main/Exploration ); précédent : 004020; suivant : 004022Synthesis and evaluation of oligodeoxynucleotides containing acyclic nucleosides: introduction of three novel analogues and a summary.
Auteurs : P. Nielsen [Danemark] ; L H Drei E ; J. WengelSource :
- Bioorganic & medicinal chemistry [ 0968-0896 ] ; 1995.
Descripteurs français
- KwdFr :
- Données de séquences moléculaires, Dénaturation d'acide nucléique, Exonucleases (métabolisme), Hybridation d'acides nucléiques, Nucléosides (synthèse chimique), Oligodésoxyribonucléotides (), Oligodésoxyribonucléotides (métabolisme), Oligodésoxyribonucléotides (synthèse chimique), Structure moléculaire, Séquence nucléotidique.
- MESH :
English descriptors
- KwdEn :
- Base Sequence, Exonucleases (metabolism), Molecular Sequence Data, Molecular Structure, Nucleic Acid Denaturation, Nucleic Acid Hybridization, Nucleosides (chemical synthesis), Oligodeoxyribonucleotides (chemical synthesis), Oligodeoxyribonucleotides (chemistry), Oligodeoxyribonucleotides (metabolism).
- MESH :
- chemical , chemical synthesis : Nucleosides, Oligodeoxyribonucleotides.
- chemical , chemistry : Oligodeoxyribonucleotides.
- chemical , metabolism : Exonucleases, Oligodeoxyribonucleotides.
- Base Sequence, Molecular Sequence Data, Molecular Structure, Nucleic Acid Denaturation, Nucleic Acid Hybridization.
Abstract
Novel flexible oligodeoxynucleotides containing (S)-1-(2,3-dihydroxypropyl)thymine or 2',3'-seco-thymidine nucleoside analogues were synthesized on an automated DNA-synthesizer. Oligodeoxynucleotides with one, two or three acyclic nucleosides incorporated in the middle or in the ends of 17-mers have been evaluated. 3'-End-modified oligomers were significantly stabilized towards 3'-exonucleolytic degradation compared to unmodified analogues and showed acceptable hybridization properties as measured by UV experiments. For oligodeoxynucleotide analogues containing the three novel acyclic monomers in the middle, a more pronounced reduction in duplex stability was observed. All oligodeoxynucleotides containing acyclic nucleoside analogues made so far are evaluated with respect to stability towards 3'-exonucleolytic degradation and hybridization properties.
DOI: 10.1016/0968-0896(94)00143-q
PubMed: 8612043
Affiliations:
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Le document en format XML
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<term>Molecular Structure</term>
<term>Nucleic Acid Denaturation</term>
<term>Nucleic Acid Hybridization</term>
<term>Nucleosides (chemical synthesis)</term>
<term>Oligodeoxyribonucleotides (chemical synthesis)</term>
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<term>Oligodésoxyribonucléotides ()</term>
<term>Oligodésoxyribonucléotides (métabolisme)</term>
<term>Oligodésoxyribonucléotides (synthèse chimique)</term>
<term>Structure moléculaire</term>
<term>Séquence nucléotidique</term>
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<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Exonucleases</term>
<term>Oligodeoxyribonucleotides</term>
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<front><div type="abstract" xml:lang="en">Novel flexible oligodeoxynucleotides containing (S)-1-(2,3-dihydroxypropyl)thymine or 2',3'-seco-thymidine nucleoside analogues were synthesized on an automated DNA-synthesizer. Oligodeoxynucleotides with one, two or three acyclic nucleosides incorporated in the middle or in the ends of 17-mers have been evaluated. 3'-End-modified oligomers were significantly stabilized towards 3'-exonucleolytic degradation compared to unmodified analogues and showed acceptable hybridization properties as measured by UV experiments. For oligodeoxynucleotide analogues containing the three novel acyclic monomers in the middle, a more pronounced reduction in duplex stability was observed. All oligodeoxynucleotides containing acyclic nucleoside analogues made so far are evaluated with respect to stability towards 3'-exonucleolytic degradation and hybridization properties.</div>
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